ANCOMP

NAME

ancomp -- compare alignment of two sets of annotations

SYNOPSIS

ancomp (-r anitem) (-t anitem) (-m matchfile) (-h histfile) file

DESCRIPTION

ancomp is a program to measure the alignment accuracy of a set of automatically aligned annotations against a reference set. Statistics of mean alignment error and a breakdown of accuracy per annotation label is provided. It is assumed that the labels themselves are correct.

OPTIONS

-I Identify program name and version number.

-i item Select input item number.

-r anitem Select reference annotation item. Default first.

-t anitem Select test annotation item. Default last.

-m matchfile Store raw information about matches into given file.

-h histfile Store histogram of distances into given file.

INPUT ITEMS

AN Reference annotation

AN Test annotation

VERSION/AUTHOR

1.1 Mark Huckvale


Sat Jun 29 11:18:01 2002